FastQCFastQC Report
Mon 19 Sep 2022
EGAF00000056285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000056285
File typeColorspace converted to bases
EncodingSanger / Illumina 1.9
Total Sequences38935823
Sequences flagged as poor quality0
Sequence length35
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGCCTTGGCCGTA1225680.31479493832710304No Hit
AGCAGCATTGTACAGGGCTATGACGCCTTGGCCGT983620.25262596863561865No Hit
ACCCCATAAACACCACGCCTTGGCCGTACAGCAGC537910.13815298061119705No Hit
ATGTCAAAGTGAAGAAATTCAATGAAGCGCCTTGG537140.1379552192848216No Hit
TCCCTGAGACCCTAACTTGTGACGCCTTGGCCGTA467680.12011560664840705No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)