FastQCFastQC Report
Thu 9 May 2024
EGAF00000068351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068351
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences30981519
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8715892.8132545728309832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)