FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32726104
Sequences flagged as poor quality0
Sequence length50
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC16600.010.3389451
TATGCCG17050.09.803053
ATGCCGT27450.06.0087894
GATCGGA24300.05.163398344
Produced by FastQC (version 0.11.5)