FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068544
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19382501
Sequences flagged as poor quality0
Sequence length76
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCGG6650.00152191096.44480269
CTGCGCG7507.793422E-46.245132470
CCGCGCG7150.0031135786.046927570
GCGCACG9050.00134099865.52588968
CGGTTCA13956.3162515E-65.2191071
GCGCGCA9150.0091346995.075103868
Produced by FastQC (version 0.11.5)