FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068599
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19896240
Sequences flagged as poor quality0
Sequence length76
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGCGG4208.890658E-610.03492269
GCGCGGC7301.0470069E-46.737215570
GCGCGCA5900.0036911076.548210669
Produced by FastQC (version 0.11.5)