FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068622
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19932674
Sequences flagged as poor quality0
Sequence length76
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCG3551.3865251E-410.17136368
TCGCGCG3500.00117243289.44769870
TAGATCG12750.08.89971154
CGGCATT18650.08.3249691
AGCGTCG10907.2759576E-128.27318665
ACGCGCG5953.5559882E-58.02745670
TGAACCG12900.07.6852813
CGCGGCG10053.5688572E-87.311650870
GCGTCGT10004.5363777E-87.216884666
CGTCGTG10054.964386E-87.181553467
GCGCGCG16503.6379788E-126.6801970
CCGCGCG9304.874655E-66.65915169
GAGCGCG11951.2173405E-76.456585470
CGAGCGC6300.00499940526.360701669
GACGCGC6950.0020015846.289981469
CGCCGCG7507.644273E-46.255132767
CACGCGA7150.00275193276.114037569
GCGCGAG11008.857793E-66.012171370
GAACCGA14803.5761332E-96.00522314
TCGCGTG6750.0093614535.987429670
Produced by FastQC (version 0.11.5)