FastQCFastQC Report
Wed 11 May 2022
EGAF00000068636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068636
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences27377963
Sequences flagged as poor quality0
Sequence length95
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7299122.6660566383262334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)