FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068658
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19312170
Sequences flagged as poor quality0
Sequence length76
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGCGA3050.00588246679.200767556
CGCGCGC13008.185452E-117.066237470
CGCCGCG10108.0142854E-86.996274570
TGCCGCG6106.457935E-46.950397570
CGACGGG5300.0091459166.65853568
GGGTCGA8701.4370756E-46.08736569
CAGCGCG10801.2389972E-55.88853170
CCGCACG7800.00160197225.881705868
GGTCGCA7500.00663384385.649074669
AGCGGCG8800.00110552895.610765567
ATGGTCG7650.0083545575.53218367
CGTGGCG10252.2000779E-45.515112470
CACGCGC12301.6948226E-55.45766370
CGCGCGG11805.1053772E-55.389503570
ACGCGGG10653.7940362E-45.30797270
GCGCCGC12158.104597E-55.2342570
CGGCGCG10300.00139059485.145318570
GAGCGCG11056.7071733E-45.098133664
GCCGCGG14701.1966349E-55.03823867
Produced by FastQC (version 0.11.5)