FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068659
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19541515
Sequences flagged as poor quality0
Sequence length76
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCGT1500.005925245614.00515648
CGACGAG2903.0081382E-410.95311366
TAGCGCG2350.00853445710.54114570
GGCGACG7151.2678356E-99.4038470
GCGACGA3200.0082020848.83560768
TCGCGGG6351.6976282E-68.35313269
GTCGCGG4900.00421467667.212739568
GACGCGC5150.00683293266.862606568
AAGCGCG5800.00287345456.70650969
CGGCGAC5850.003144326.649188569
ATGCCGA10702.0066873E-66.19161414
CGCGAGG8406.3327857E-45.86170260
CGGCTAA15607.345079E-95.81843951
CGCGGCG12808.913812E-75.805865370
CGGCGAG7350.00517071045.77765470
CGCTGCG7400.005698585.727208667
CGGTTCA12951.4225698E-65.6611841
GCGCGCG17451.1777956E-85.47552870
CTGCGCG9400.00245616075.2666269
GCGGTTC8650.0061359695.25101731
Produced by FastQC (version 0.11.5)