FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068666
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19501470
Sequences flagged as poor quality0
Sequence length76
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN344350.17657643244329788No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG5502.4468864E-68.93301965
CGTCGTG5653.521025E-68.69576867
GCGTCGT5057.875485E-58.3397366
Produced by FastQC (version 0.11.5)