FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068667
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19625925
Sequences flagged as poor quality0
Sequence length76
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGCG5000.00505273747.079542663
GTTCGGC5250.0083967426.717805442
GCGCCGC6000.00327192226.624007770
TAGATCG8751.9679452E-56.51428754
ACCGCGC11253.584194E-55.51083238
CGCCCCG16201.5797377E-65.12970370
Produced by FastQC (version 0.11.5)