FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068668
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences20745978
Sequences flagged as poor quality0
Sequence length76
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGCG2600.00611655911.02467167
GCGCGCG6854.44712E-79.16767670
GGTTCGC4554.441635E-49.05889569
CCGCGCG5100.00138037628.08195469
CGGTCTA7408.4392773E-46.78903670
CCCGCGC10803.8058635E-56.22743665
GCGGCGC7250.00638424656.21291867
GCGCCGG8600.00447786655.852975463
GGGTCCG10953.0666264E-45.758246465
CACGCGC8700.0066376015.648773768
GGCGCCG9600.0026046235.64662162
CGCCGCC9850.00404960435.439934769
GGCGGCG12103.3071346E-45.359565366
CCGCCGC11050.0021926115.314466563
GGGGGGG675600.05.248707370
GGGTGCG21201.2155033E-75.13447570
Produced by FastQC (version 0.11.5)