FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068704
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences16879217
Sequences flagged as poor quality0
Sequence length40
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC1463680.8671492285453762No Hit
........................................688080.4076492410755784No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
.CTGCAA252.0292943E-434.00000413
.TACCCT252.0292943E-434.00000413
A.CACCT252.0292943E-434.00000412
.TTCTTT351.092525E-634.00000413
TTCAA.A252.0292943E-434.0000048
CCAAG.C252.0292943E-434.0000048
AT.TTCT252.0292943E-434.00000411
CAA.TTC252.0292943E-434.00000410
CTACC.A252.0292943E-434.0000048
CTG.ACC252.0292943E-434.00000410
A.AACAC252.0292943E-434.00000412
T.TTCTC252.0292943E-434.00000412
A.AAACA252.0292943E-434.00000412
T.TTATT252.0292943E-434.00000412
AA.AACA252.0292943E-434.00000411
AA.AAAC252.0292943E-434.00000411
G.CAGCC252.0292943E-434.00000412
C.CACAT252.0292943E-434.00000412
ACC.CCC252.0292943E-434.00000410
AGCAG.A252.0292943E-434.0000048
Produced by FastQC (version 0.11.5)