FastQCFastQC Report
Sat 23 Apr 2022
EGAF00000068789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000068789
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19095582
Sequences flagged as poor quality0
Sequence length40
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
........................................650110.3404504769742027No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TT.AAAG252.0293042E-434.00000416
TT.AAAA301.4848949E-534.00000416
CCCAC.T252.0293042E-434.00000413
A.GGAAT252.0293042E-434.00000417
T.GAGAC252.0293042E-434.00000417
CTT.CTC252.0293042E-434.00000415
AAGAA.A301.4848949E-534.00000413
GA.AGGA252.0293042E-434.00000416
TT.TTTC252.0293042E-434.00000416
TTG.TAG252.0293042E-434.00000415
TT.TTGC252.0293042E-434.00000416
TT.TTGA252.0293042E-434.00000416
C.CATAA351.0925341E-634.00000417
A.CAAAA252.0293042E-434.00000417
.ACCAAA252.0293042E-434.00000418
.AAAGAA252.0293042E-434.00000418
GAGA.GG301.4848949E-534.00000414
GA.AACT252.0293042E-434.00000416
G.TTGTG301.4848949E-534.00000417
TTT.AAA301.4848949E-534.00000415
Produced by FastQC (version 0.11.5)