FastQCFastQC Report
Tue 27 Sep 2022
EGAF00000117123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000117123
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences16776245
Sequences flagged as poor quality0
Sequence length75
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN595170.35476949698815197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)