FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000127532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000127532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9736
Sequences flagged as poor quality0
Sequence length42-424
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCTATGCGAGGCCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTT417442.871815940838125No Hit
TCTCTATGCGAGGCCTGCTGAAATGACTGAATATAAACTTGTGGTAGTTG219422.534921939194742No Hit
TCTCTATGCGTGTTGGATCATATTCGTCCACAAAATGATTCTGAATTAGC188019.309778142974526No Hit
TCTCTATGCGAGGCCTGCTGAATGACTGAATATAAACTTGTGGTAGTTGG1751.7974527526705013No Hit
TCTCTATGCGTGTTGGATCATATTCGTCCACAAATGATTCTGAATTAGCT1551.5920295809367295No Hit
TCTCTATGCGAGGCCTGCTGAATGACTGAATATAACTTGTGGTAGTTGGA1141.1709120788824978No Hit
TCTCTATGCGAGGCCTGCTGAAAAATGACTGAATATAAACTTGTGGTAGT1121.1503697617091209No Hit
TCTCTATGCGTGTTGGATCATATTCGTCCACAATGATTCTGAATTAGCTG690.7087099424815119No Hit
TCTCTATGCGAGGCCTGCTAGAAAATGACTGAATATAAACTTGTGGTAGT500.5135579293344289No Hit
TCTCTATGCGTGTTGGATCATATTCGTCCACAAAAATGATTCTGAATTAG330.3389482333607231No Hit
TCTCTATGCGTGTTGGATCATAATTCGTCCACAAAATGATTCTGAATTAG290.29786359901396875No Hit
TCTCTATGCGTTGTTGGATCATATTCGTCCACAAAATGATTCTGAATTAG200.2054231717337716No Hit
TCTCTATGCGAGGCCTGCTGAATAGACTGAATATAACTTGTGGTAGTTGG190.195152013147083No Hit
TCTCTATGCGAGGCCTGCTGAAAAATGACTGAATATAAAACTTGTGGTAG190.195152013147083No Hit
TCTCTATGCGTGTTGGATCATATTCGTCCAACAAAATGATTCTGAATTAG180.1848808545603944No Hit
TCTCTATGCGAGGCCTGCTGAAAATGACTGAATATAAGCTTGTGGTAGTT180.1848808545603944No Hit
TCTCTATGCGAGGCCTGCTAGAAATGACTGAATATAAACTTGTGGTAGTT170.17460969597370585No Hit
TCTCTATGCGAGGCCTGCTAGAAAATGACTGAATAATAAACTTGTGGTAG120.12325390304026293No Hit
TCTCTATGCGAGGCCTGCTGAATAGACTGAATATAACTTAGTGGTAGTTG120.12325390304026293No Hit
TCTCTATGCGAGGCCTGCTGAAATAGACTGAATATAAACTTGTGGTAGTT110.11298274445357437No Hit
TCTCTATGCGAGGCCTGCTGACAATGACTGAATATAAACTTGTGGTAGTT100.1027115858668858No Hit
TCTCTATGCGAGGCCTGCTGAAAATGACTGGATATAAACTTGTGGTAGTT100.1027115858668858No Hit
TCTCTATGCGAGGCTTGCTGAAAATGACTGAATATAAACTTGTGGTAGTT100.1027115858668858No Hit
TCTCTATGCGTGTTGGATCATATTCGTTCACAAAATGATTCTGAATTAGC100.1027115858668858No Hit
TCTCTATGCGTGTTGGATCATATCGTCCACAAAATGATTCTGAATTAGCT100.1027115858668858No Hit
TCTCTATGCGAGGCCTGCTGAAAATGACTGAATATAAAACTTGTGGTAGT100.1027115858668858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)