FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000127536

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000127536
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17346
Sequences flagged as poor quality0
Sequence length43-258
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTATCAGCAGGCCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTT885951.07229332410931No Hit
TAGTATCAGCGAATGGTCCTGCACCAGTAATATGCATATTAAAACAAGAT442125.487144010146434No Hit
TAGTATCAGCAGGCCTGCTGAAATGACTGAATATAAACTTGTGGTAGTTG215612.429378531073446No Hit
TAGTATCAGCAGGCCTGCTGAAAAATGACTGAATATAAACTTGTGGTAGT2011.1587685921826356No Hit
TAGTATCAGCAGGCCTGCTGAAAATGACTGGTGCAGGACCATTCGCTGATACTA1560.8993427879626428No Hit
TAGTATCAGCAGGCCTGCTAGAAAATGACTGAATATAAACTTGTGGTAGT1460.8416926092470887No Hit
TAGTATCAGCAGGCCTGCTGAATGACTGAATATAAACTTGTGGTAGTTGG1150.6629770552288712No Hit
TAGTATCAGCGAATGGTCCTGCACCAGTAATATGCATATTAAACAAGATT1030.5937968407702064No Hit
TAGTATCAGCAGGCCTGCTGAAATGACTGGTGCAGGACCATTCGCTGATACTA940.5419116799262077No Hit
TAGTATCAGCGAATGGTCCTGCAACCAGTAATATGCATATTAAAACAAGA390.2248356969906607No Hit
TAGTATCAGCAGGCCTGCTGAAAATGACTGATACTACTGATACTA380.21907067911910524No Hit
TAGTATCAGCGAATGGTCCTGCACCAGTAATATGCATATTAAAAACAAGA370.21330566124754985No Hit
TAGTATCAGCAGGCCTGCTGAATGACTGGTGCAGGACCATTCGCTGATACTA310.17871555401821745No Hit
TAGTATCAGCGAATGGTCCTGCACCAGTCATTTTCAGCAGGCCTGCTGATACTA310.17871555401821745No Hit
TAGTATCAGCAGGCCTGTTGAAAATGACTGAATATAAACTTGTGGTAGTT250.14412544678888503No Hit
TAGTATCAGCAGGCTTGCTGAAAATGACTGAATATAAACTTGTGGTAGTT220.12683039317421882No Hit
TAGTATCAGCAGGCCTGCTGAATGACTGAATATAACTTGTGGTAGTTGGA200.11530035743110803No Hit
TAGTATCAGCAGGCCTGCTGAAAATGACTGAATATAAACTTGTAGGTAGT200.11530035743110803No Hit
TAGTATCAGCAGGTCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTT200.11530035743110803No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)