FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000127547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000127547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11592
Sequences flagged as poor quality0
Sequence length52-344
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACGCACTCGAATGGTCCTGCACCAGTAATATGCATATTAAAACAAGAT585450.500345065562456No Hit
AGACGCACTCAGGCCTGCTGAAAAATGACTGAATATAAACTTGTGGTAGT359631.021394064872325No Hit
AGACGCACTCAGGCCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTT6525.624568668046929No Hit
AGACGCACTCGAATGGTCCTGCACCAGTAATATGCATATTAAACAAGATT3573.0797101449275366No Hit
AGACGCACTCGAATGGTCCTGCACCAGTAATATGCATATTAAAAACAAGA1181.017943409247757No Hit
AGACGCACTCGAATGGTCCTGCACCAATAATATGCATATTAAAACAAGAT860.7418909592822636No Hit
AGACGCACTCAGGCCTGCTGAAATGACTGAATATAAACTTGTGGTAGTTG710.6124913733609386No Hit
AGACGCACTCAGGCCTGCTGAAAAAATGACTGAATATAAACTTGTGGTAG600.5175983436853002No Hit
AGACGCACTCAGGCCTGCTGAAAAATGACTGAATATAAACTTGTAGGTAG400.3450655624568668No Hit
AGACGCACTCAGGCCTGCTAGAAAAATGACTGAATATAAACTTGTGGTAG340.29330572808833677No Hit
AGACGCACTCGAATGGTCCTGCACTAGTAATATGCATATTAAAACAAGAT300.2587991718426501No Hit
AGACGCACTCGAATGGTCTTGCACCAGTAATATGCATATTAAAACAAGAT230.1984126984126984No Hit
AGACGCACTCGAATGGTCCTGTACCAGTAATATGCATATTAAAACAAGAT230.1984126984126984No Hit
AGACGCACTCAGGCCTGCTGAAAAATGACTGAATATAAACTTGCGGTAGT230.1984126984126984No Hit
AGACGCACTCGAATGGGTCCTGCACCAGTAATATGCATATTAAAACAAGA210.18115942028985507No Hit
AGACGCACTCGAATGGTTCTGCACCAGTAATATGCATATTAAAACAAGAT210.18115942028985507No Hit
AGACGCACTCGAATGGTCCTGCACCAGTAATATGCATATTAACAAGATTT210.18115942028985507No Hit
AGACGCACTCGATGGTCCTGCACCAGTAATATGCATATTAAAACAAGATT170.14665286404416839No Hit
AGACGCACTCGAATGGTCTGCACCAGTAATATGCATATTAAAACAAGATT160.13802622498274672No Hit
AGACGCACTCGAATGGTCCTGCACCAGTCATTTCAGCAGGCCTGAGTGCGTCT130.1121463077984817No Hit
AGACGCACTCGAATGGCCTGCACCAGTAATATGCATATTAAAACAAGATT120.10351966873706005No Hit
AGACGCACTCGAATGGTCCTGCATCAGTAATATGCATATTAAAACAAGAT120.10351966873706005No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)