FastQCFastQC Report
Sat 11 May 2024
EGAF00000146406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000146406
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences26688767
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)