FastQCFastQC Report
Tue 28 Mar 2023
EGAF00000223616

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000223616
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences54720404
Sequences flagged as poor quality0
Sequence length90
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGAATGCTGGAGATTGTAATGGGTATGGAGACATGTCATATAAGTAAT1446720.2643840129542903No Hit
GTTTGGATGTAAAGTGAAATATTAGTTGGCGGATGAAGCAGATAGTGAGG723370.132193833949033No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCACTCATCGACCT562200.10274046953308313No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)