Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000228739 |
File type | Conventional base calls |
Encoding | Illumina 1.5 |
Total Sequences | 419589 |
Sequences flagged as poor quality | 0 |
Sequence length | 5-6 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTGGG | 1715 | 0.4087333080705166 | No Hit |
CTTTTT | 1484 | 0.35367943392224294 | No Hit |
GTTTTT | 1414 | 0.3369964417560994 | No Hit |
CTTGG | 1404 | 0.33461315716093604 | No Hit |
ATTTTT | 1367 | 0.3257950041588316 | No Hit |
CTTTG | 1306 | 0.31125696812833514 | No Hit |
CCTGG | 1214 | 0.2893307498528322 | No Hit |
GTTTT | 1064 | 0.25358148092538174 | No Hit |
CTGGC | 1051 | 0.25048321095166937 | No Hit |
CTTTT | 1017 | 0.24238004332811394 | No Hit |
ATTTT | 982 | 0.23403854724504217 | No Hit |
TTTTTT | 955 | 0.2276036788381011 | No Hit |
CTCAGG | 951 | 0.22665036500003574 | No Hit |
CTTCTT | 944 | 0.2249820657834214 | No Hit |
CCAGG | 938 | 0.2235520950263234 | No Hit |
CTTTTC | 926 | 0.22069215351212734 | No Hit |
CTCTG | 923 | 0.21997716813357834 | No Hit |
GTTTG | 922 | 0.21973883967406202 | No Hit |
CTTCC | 911 | 0.2171172266193823 | No Hit |
CTTTCT | 871 | 0.20758408823872884 | No Hit |
CTCCAC | 867 | 0.20663077440066352 | No Hit |
CAGGG | 862 | 0.20543913210308182 | No Hit |
CTCCC | 862 | 0.20543913210308182 | No Hit |
CCCAGG | 854 | 0.20353250442695114 | No Hit |
CTCCTC | 853 | 0.20329417596743482 | No Hit |
CTTTGG | 847 | 0.20186420521033677 | No Hit |
CTCAC | 841 | 0.20043423445323874 | No Hit |
CTGGGC | 835 | 0.19900426369614072 | No Hit |
CTCAGC | 824 | 0.19638265064146104 | No Hit |
GTTTTC | 816 | 0.19447602296533034 | No Hit |
CCCAGC | 815 | 0.19423769450581402 | No Hit |
CTTCCT | 803 | 0.191377752991618 | No Hit |
CCCAC | 793 | 0.18899446839645462 | No Hit |
CTCCTG | 780 | 0.18589619842274224 | No Hit |
CTGGCT | 778 | 0.18541954150370957 | No Hit |
CTTTAT | 775 | 0.18470455612516057 | No Hit |
CTCCTT | 775 | 0.18470455612516057 | No Hit |
CTTCTC | 769 | 0.18327458536806254 | No Hit |
CTTCAC | 768 | 0.18303625690854622 | No Hit |
CTTCAT | 762 | 0.1816062861514482 | No Hit |
CCTGGC | 755 | 0.17993798693483387 | No Hit |
CTTGGC | 745 | 0.1775547023396705 | No Hit |
CTGGGG | 744 | 0.17731637388015414 | No Hit |
CTCCAT | 726 | 0.1730264616088601 | No Hit |
CTTGGG | 717 | 0.17088150547321307 | No Hit |
GTTTTG | 713 | 0.16992819163514772 | No Hit |
CTGGTT | 711 | 0.16945153471611504 | No Hit |
CTTCTG | 703 | 0.16754490703998437 | No Hit |
CTTTGC | 703 | 0.16754490703998437 | No Hit |
ATTTG | 698 | 0.1663532647424027 | No Hit |
CTGAGG | 695 | 0.16563827936385367 | No Hit |
CACAC | 693 | 0.16516162244482102 | No Hit |
CTTTC | 692 | 0.16492329398530467 | No Hit |
GTTTGG | 690 | 0.164446637066272 | No Hit |
CAAGG | 683 | 0.16277833784965764 | No Hit |
CTGCTG | 681 | 0.16230168093062497 | No Hit |
CTTTTG | 676 | 0.16111003863304327 | No Hit |
CTCATT | 667 | 0.15896508249739627 | No Hit |
CTGGAT | 658 | 0.15682012636174925 | No Hit |
CTTTGT | 656 | 0.15634346944271654 | No Hit |
CTTCCC | 646 | 0.1539601848475532 | No Hit |
GGAGG | 641 | 0.15276854254997152 | No Hit |
CCAGC | 635 | 0.1513385717928735 | No Hit |
GTTTCT | 633 | 0.15086191487384082 | No Hit |
CTGAC | 619 | 0.14752531644061212 | No Hit |
CTGCC | 618 | 0.1472869879810958 | No Hit |
CTCATC | 616 | 0.14681033106206312 | No Hit |
GTTTC | 616 | 0.14681033106206312 | No Hit |
CTTCT | 614 | 0.14633367414303045 | No Hit |
CTTGTT | 605 | 0.14418871800738342 | No Hit |
CTGGCC | 604 | 0.14395038954786707 | No Hit |
CTCTGC | 600 | 0.14299707570980175 | No Hit |
GTTTAT | 599 | 0.1427587472502854 | No Hit |
CCTGGG | 597 | 0.14228209033125272 | No Hit |
CTCCT | 595 | 0.14180543341222007 | No Hit |
CTGCTT | 587 | 0.13989880573608937 | No Hit |
CCCCAC | 583 | 0.13894549189802402 | No Hit |
CTTGT | 583 | 0.13894549189802402 | No Hit |
CGGGG | 579 | 0.13799217805995867 | No Hit |
CTGGAC | 578 | 0.13775384960044232 | No Hit |
CTGTG | 574 | 0.136800535762377 | No Hit |
CTGCAT | 571 | 0.136085550383828 | No Hit |
CTCGG | 568 | 0.13537056500527897 | No Hit |
CCCACC | 567 | 0.13513223654576265 | No Hit |
GTGGG | 566 | 0.1348939080862463 | No Hit |
GCCAGG | 565 | 0.13465557962672997 | No Hit |
GTTGG | 563 | 0.1341789227076973 | No Hit |
CTCACT | 561 | 0.13370226578866462 | No Hit |
ATTTTC | 557 | 0.13274895195059927 | No Hit |
CTTGGT | 556 | 0.13251062349108295 | No Hit |
CTTGC | 553 | 0.13179563811253392 | No Hit |
CTCTGG | 549 | 0.1308423242744686 | No Hit |
CTTTCC | 548 | 0.13060399581495225 | No Hit |
CTGGGT | 542 | 0.12917402505785422 | No Hit |
ATTTTG | 542 | 0.12917402505785422 | No Hit |
CTGAGC | 542 | 0.12917402505785422 | No Hit |
CCTGC | 539 | 0.12845903967930522 | No Hit |
CTTGTC | 538 | 0.1282207112197889 | No Hit |
CCTTG | 537 | 0.12798238276027255 | No Hit |
GTTTGT | 535 | 0.12750572584123987 | No Hit |
CTGCAC | 534 | 0.12726739738172355 | No Hit |
CTGGTG | 534 | 0.12726739738172355 | No Hit |
CCACC | 533 | 0.12702906892220722 | No Hit |
CAGGC | 530 | 0.1263140835436582 | No Hit |
CTCAT | 530 | 0.1263140835436582 | No Hit |
GTTCTT | 528 | 0.12583742662462552 | No Hit |
CTTGAT | 526 | 0.12536076970559284 | No Hit |
CTCAGT | 524 | 0.12488411278656018 | No Hit |
CTGGTC | 518 | 0.12345414202946216 | No Hit |
TTTTT | 517 | 0.12321581356994583 | No Hit |
CTAGG | 516 | 0.1229774851104295 | No Hit |
CCTCC | 515 | 0.12273915665091314 | No Hit |
CTTAC | 514 | 0.12250082819139682 | No Hit |
GGATG | 513 | 0.12226249973188048 | No Hit |
GGAAGG | 504 | 0.12011754359623347 | No Hit |
CCCACT | 503 | 0.11987921513671712 | No Hit |
CCTGCC | 502 | 0.11964088667720078 | No Hit |
CACAGG | 500 | 0.11916422975816812 | No Hit |
CCGGG | 496 | 0.11821091592010277 | No Hit |
CTGAAT | 494 | 0.1177342590010701 | No Hit |
CCTCAC | 492 | 0.11725760208203743 | No Hit |
CTGATT | 488 | 0.11630428824397207 | No Hit |
CTGGT | 487 | 0.11606595978445573 | No Hit |
GGGAGG | 484 | 0.11535097440590672 | No Hit |
CTGACT | 484 | 0.11535097440590672 | No Hit |
CCCTG | 483 | 0.1151126459463904 | No Hit |
ATTTAT | 483 | 0.1151126459463904 | No Hit |
CCTCAT | 483 | 0.1151126459463904 | No Hit |
TTTTG | 480 | 0.11439766056784138 | No Hit |
GTCAGG | 476 | 0.11344434672977603 | No Hit |
CTCTTC | 476 | 0.11344434672977603 | No Hit |
CTCTGT | 476 | 0.11344434672977603 | No Hit |
CCTCCT | 472 | 0.1124910328917107 | No Hit |
CTCTTT | 471 | 0.11225270443219436 | No Hit |
GGGGG | 471 | 0.11225270443219436 | No Hit |
CTGCCT | 469 | 0.1117760475131617 | No Hit |
GCCAC | 469 | 0.1117760475131617 | No Hit |
GGAAAT | 469 | 0.1117760475131617 | No Hit |
CTGCTC | 467 | 0.11129939059412901 | No Hit |
CTTGCT | 464 | 0.11058440521558 | No Hit |
CACAGC | 462 | 0.11010774829654733 | No Hit |
CTCCCT | 462 | 0.11010774829654733 | No Hit |
GCTGG | 460 | 0.10963109137751466 | No Hit |
GGAAC | 459 | 0.10939276291799832 | No Hit |
CCAGCC | 456 | 0.10867777753944931 | No Hit |
CCAGCT | 456 | 0.10867777753944931 | No Hit |
ATTTC | 455 | 0.10843944907993298 | No Hit |
CTCATG | 454 | 0.10820112062041665 | No Hit |
CCCATC | 453 | 0.10796279216090032 | No Hit |
GTCAC | 452 | 0.10772446370138397 | No Hit |
CTGAAC | 451 | 0.10748613524186763 | No Hit |
GTTCAT | 450 | 0.10724780678235131 | No Hit |
CTCCCC | 446 | 0.10629449294428596 | No Hit |
CAGAAT | 445 | 0.10605616448476964 | No Hit |
CCAAC | 444 | 0.10581783602525328 | No Hit |
AAATG | 441 | 0.10510285064670427 | No Hit |
CCCAGT | 441 | 0.10510285064670427 | No Hit |
CTCAAT | 439 | 0.1046261937276716 | No Hit |
CTTGCC | 437 | 0.10414953680863892 | No Hit |
CTCTC | 436 | 0.10391120834912258 | No Hit |
CCTGTC | 434 | 0.10343455143008992 | No Hit |
CAGCTT | 432 | 0.10295789451105725 | No Hit |
CACCAC | 432 | 0.10295789451105725 | No Hit |
CCAGGC | 431 | 0.10271956605154091 | No Hit |
CCCCAT | 429 | 0.10224290913250823 | No Hit |
CAGCC | 428 | 0.1020045806729919 | No Hit |
ATTTGG | 428 | 0.1020045806729919 | No Hit |
CAAACT | 423 | 0.10081293837541022 | No Hit |
GTAAAT | 420 | 0.10009795299686121 | No Hit |
GCCAGC | 420 | 0.10009795299686121 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)