FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000278929

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278929
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521029
Sequences flagged as poor quality0
Sequence length35-151
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT23068144.27411909893691No Hit
GTTCAAACTGATGGGACCCACTCCATCGAGATTTCACTGTAGCTAGACCA19533437.49004374036762No Hit
ACTGTTCAAACTGATGGGACCCACTCCATCGAGATTTCACTGTAGCTAGA245524.712213715551342No Hit
GTTCAAACTGATGGGACCCACTCCATCGAGACTTCACTGTAGCTAGACCA37710.7237600978064561No Hit
CGTTCAAACTGATGGGACCCACTCCATCGAGATTTCACTGTAGCTAGACC15970.3065088507549484No Hit
AGTTCAAACTGATGGGACCCACTCCATCGAGATTTCACTGTAGCTAGACC13720.2633250740361861No Hit
TCCACAAACTGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT11210.21515117200770015No Hit
TCCTCAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT10230.19634223814797258No Hit
TCTACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT9510.18252342959796863No Hit
TCCACAAAATGGATCTAGACAACTGTTCAAACTGATGGGACCCACTCCAT8910.17100775580629868No Hit
TTCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT7820.15008761508476495No Hit
TCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCATC7690.14759255242990313No Hit
TCCACAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCATC7620.1462490571542083No Hit
TCCACAAAATGGATCCAGCCAACTGTTCAAACTGATGGGACCCACTCCAT7520.14432977818893No Hit
TCCACTAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT5810.11151010788267063No Hit
TCCACAAAATGGATCCATACAACTGTTCAAACTGATGGGACCCACTCCAT5790.11112625208961498No Hit
CCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCATC5600.10747962205558616No Hit
GGTTCAAACTGATGGGACCCACTCCATCGAGATTTCACTGTAGCTAGACC5500.10556034309030785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)