FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000278934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37230
Sequences flagged as poor quality0
Sequence length21-151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTTGCTCTGATAGGAAAAT1737346.66398066075745No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT1629343.763094278807415No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAC5121.3752350255170562No Hit
TCCTCAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT820.220252484555466No Hit
TCCACAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCATC780.209508460918614No Hit
TCCACAAACTGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT720.19339242546333602No Hit
TCTACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT630.169218372280419No Hit
TCCACAAAATGGATCTAGACAACTGTTCAAACTGATGGGACCCACTCCAT620.16653236637120603No Hit
TCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCATC620.16653236637120603No Hit
TCCACAAAATGGATCCATACAACTGTTCAAACTGATGGGACCCACTCCAT470.126242277733011No Hit
TGCTTGCTCTGATAGGAAATG460.12355627182379801No Hit
CCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCATC450.12087026591458502No Hit
TTCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT430.115498254096159No Hit
TCCACTAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT410.110126242277733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)