FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000278939

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278939
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140582
Sequences flagged as poor quality0
Sequence length35-151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAAATGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTC6149243.741019476177605No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGA5581239.70067291687413No Hit
GCTCAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGG16301.1594656499409597No Hit
GGGAAATGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTCT5630.4004780128323683No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGT4030.2866654336970593No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGC3770.2681708895875717No Hit
GGAAAATGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTCT2920.2077079569219388No Hit
GGGAAAATGACAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTCT2920.2077079569219388No Hit
CGCAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGA2010.14297705253873183No Hit
CAAAGCAATTTCTACGCGAGATCCTCTCTCTGAAATCACTGAGCAGGAGA1810.12875048014681822No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGG1770.12590516566843551No Hit
CAAAGCAATTTCTGCACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGA1720.1223485225704571No Hit
GGGAAAATGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCCC1700.12092586533126574No Hit
GGGAAAATGACAACGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTC1650.11736922223328733No Hit
GGGCAAATGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTC1650.11736922223328733No Hit
GGGAAAAGGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTC1630.11594656499409597No Hit
CACAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGA1610.1145239077549046No Hit
CAAAGCAATTTCTACACGGGATCCTCTCTCTGAAATCACTGAGCAGGAGA1560.1109672646569262No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGGGA1540.10954460741773485No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAAA1530.10883327879813917No Hit
CAAAGCAATTGCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGA1520.10812195017854348No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGGGCAGGAGA1480.10527663570016077No Hit
CAAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAACAGGAGA1470.10456530708056508No Hit
GGGAAAATGCAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTCT1410.100297335362991No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)