FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000278956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112676
Sequences flagged as poor quality0
Sequence length35-151
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT4842142.97365898682949No Hit
GCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG4387838.94174447087224No Hit
GCAAGAGGCTTTGGAGTATTTCATGAAACAAATNAATGATGCACATCATG17011.5096382548191274No Hit
AGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCAT6700.5946252973126487No Hit
CTGAGCAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC2540.22542511271255636No Hit
AGCAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG2150.1908125954062977No Hit
GCAAGAGGCGTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG2020.17927508963754482No Hit
GCAAGAGGCTGTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG1840.1633000816500408No Hit
CTGAGCAAGAGGCTTTGGAGTATTTCATGAAGCAAATGAATGATGCACAT1800.15975007987503995No Hit
CTGGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC1800.15975007987503995No Hit
CTGAGCAAGAGGCTTGGAGTATTTCATGAAACAAATGAATGATGCACATC1730.15353757676878838No Hit
GTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT1710.15176257588128794No Hit
GCAAGAGGCTTTGGAGTATTTCATGAAGCAAATGAATGATGCACATCATG1620.14377507188753594No Hit
AGCAAGAGGCTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG1520.13490006745003372No Hit
GCAAGATGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG1380.12247506123753062No Hit
CTGAGCAAGAGGCTTTGGGGTATTTCATGAAACAAATGAATGATGCACAT1370.1215875607937804No Hit
ACAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG1350.11981255990627995No Hit
GCAAGAGGCTTTGGGGTATTTCATGAAACAAATGAATGATGCACATCATG1310.11626255813127907No Hit
TGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC1310.11626255813127907No Hit
CTGAGCAAGAGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC1260.11182505591252796No Hit
CTGAGAAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT1250.11093755546877773No Hit
CTGAGCAAGAGGCGTTGGAGTATTTCATGAAACAAATGAATGATGCACAT1250.11093755546877773No Hit
CGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC1230.1091625545812773No Hit
CTAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC1230.1091625545812773No Hit
GCAAGAGGTTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG1210.10738755369377685No Hit
GAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCA1190.1056125528062764No Hit
GCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCCCATCATG1170.10383755191877596No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)