FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000278957

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278957
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491529
Sequences flagged as poor quality0
Sequence length35-151
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT21059742.845284815341515No Hit
GCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG18707538.059809288973796No Hit
GCAAGAGGCTTTGGAGTATTTCATGAAACAAATNAATGATGCACATCATG65111.324642086224821No Hit
AGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCAT28370.5771785591491041No Hit
CTGAGCAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC12580.25593606887894715No Hit
AGCAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG10750.21870530528208917No Hit
GCAAGAGGCTGTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG9080.1847296904150111No Hit
CTGAGCAAGAGGCTTGGAGTATTTCATGAAACAAATGAATGATGCACATC8740.17781249936422877No Hit
GCAAGAGGCGTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG8650.17598147820372756No Hit
CTGGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC8300.16886084035733395No Hit
CTGAGCAAGAGGCTTTGGGGTATTTCATGAAACAAATGAATGATGCACAT7700.15665403262065922No Hit
GTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT7590.1544161178689355No Hit
AGCAAGAGGCTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG7410.1507540755479331No Hit
GCAAGAGGCTTTGGGGTATTTCATGAAACAAATGAATGATGCACATCATG6870.1397679485849258No Hit
ACAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG6430.13081628957803101No Hit
CTGAGAAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT6280.1277645876438623No Hit
GCAATAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG5940.12084739659307996No Hit
GCAAGATGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG5880.11962671581941249No Hit
TGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC5730.11657501388524379No Hit
CTAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC5600.11393020554229762No Hit
CAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATGG5510.11209918438179639No Hit
GCAAGAGGTTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATG5480.11148884399496264No Hit
CTGAGCAAGAGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC5420.11026816322129518No Hit
CTGAGCAAGAGGTTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT5360.10904748244762771No Hit
CTGAGAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC5090.10355441896612406No Hit
GAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCA5000.10172339780562287No Hit
TTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACAT4980.10131650421440037No Hit
CTGAGCAAGGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATC4970.10111305741878913No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)