FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000278973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences382154
Sequences flagged as poor quality0
Sequence length35-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA28053173.40784081809952No Hit
TGCTATGCAAATACAATAAACTGGAGTTGGTTCTAATGGGTCC4432011.597418841618824No Hit
TGCTATGCAAATACAATAAACTGGGTGACTGGAGTTGGTTCTAATGGGTCC61761.6161024089764857No Hit
TGCTATGCAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG11530.3017108286188291No Hit
TGCTATGCAAATACAATAAACTGGAGTTGGTTCTAATGGGTCCAGATCGG9740.2548710729182476No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGGCCTCCGGTCA8380.21928332557031982No Hit
GCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG7550.19756433270356977No Hit
TGCTATGCAAATACAATAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG7310.19128414199511193No Hit
TGCTATGCAAATACATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG7000.1831722289966872No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCTGGTCA6810.1782004113524914No Hit
TGCTATGCAAATACCATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA6440.16851845067695223No Hit
TGCTATGCAAATACAATAAACTGGGAAAAACTGTTTGGGACCTCCGGTCA6170.16145323612993714No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTCGGGACCTCCGGTCA5950.15569639464718413No Hit
TGCTATGCAAATCCAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA5840.1528179739058076No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGCCA5490.14365936245597324No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCCCCGGTCA5400.14130429094030156No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCGCCGGTCA5360.1402575924888919No Hit
TGCTCTGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA5290.13842587019892502No Hit
CTCCGATCTTGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGAC5190.13580912407040094No Hit
TGCTATGCAAAGACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA5150.1347624256189913No Hit
TGTTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA4920.12874390952338585No Hit
TGCTATCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG4690.12272539342778042No Hit
TGCGATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA4650.1216786949763708No Hit
TGCTATGCAAATACAATAAATTGGAAAAAACTGTTTGGGACCTCCGGTCA4570.1195852980735515No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCG4490.11749190117073222No Hit
TGCTATGCAAATACAATAAACTGGAAAAAGCTGTTTGGGACCTCCGGTCA4300.11252008352653643No Hit
TGCTATGCAAATACAATAAACTGGAGTTGGTTCTAATGGGTCA4250.11121171046227438No Hit
TGCTATGCAAATCAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG4050.10597821820522617No Hit
TGCTATGCAAATACACTAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA4020.10519319436666894No Hit
CTTCGATCTTGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGAC3920.10257644823814484No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGCTTGGGACCTCCGGTCA3900.10205309901244002No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)