FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000278974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000278974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125138
Sequences flagged as poor quality0
Sequence length35-151
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA9107472.77885214722946No Hit
TGCTATGCAAATACAATAAACTGGAGTTGGTTCTAATGGGTCC77236.171586568428455No Hit
TGCTATGCAAATACAATAAACTGGGTGACTGGAGTTGGTTCTAATGGGTCC8040.6424906902779332No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGGCCTCCGGTCA6120.4890600776742476No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGCCA4260.3404241717144273No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGCTTGGGACCTCCGGTCA4070.32524093400885423No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGCCCTCCGGTCA3850.3076603429813486No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTCGGGACCTCCGGTCA3810.30446387188543844No Hit
TGCTATGCAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG3780.3020665185635059No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGATCTCCGGTCA3480.27809298534418003No Hit
TGCTATGCAAATACAATAAACTGGAAAAACTGTTTGGGACCTCCGGTCAG3300.26370886541258454No Hit
TGCTATGCAAATACAATAAACTGGAGTTGGTTCTAATGGGTCCAGATCGG3070.24532915661110133No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGAACTCCGGTCA3050.24373092106314628No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTACGGTCA2930.23414150777541592No Hit
TGCTATGCAAATACAATAAACTGGAAAAAGCTGTTTGGGACCTCCGGTCA2920.23334239000143842No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTCTGGGACCTCCGGTCA2750.2197573878438204No Hit
TGCTATGCAAATACAATAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG2540.20297591459029232No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTTA2500.1997794434943822No Hit
TGCTATGCAAATACAATAAACGGGAAAAAACTGTTTGGGACCTCCGGTCA2430.1941856190765395No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCGCCGGTCA2250.17980149914494398No Hit
TGCTATGCAAATCCAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA2170.17340855695312374No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCCCCGGTCA2160.17260943917914623No Hit
TGCTATGCAAATACAATAAACTGGGAAAAACTGTTTGGGACCTCCGGTCA2090.16701561476130353No Hit
GCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG2070.16541737921334845No Hit
TGCTATGCAAATACATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCAG2060.16461826143937092No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGTCCTCCGGTCA2030.16222090811743836No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCG2020.16142179034346082No Hit
TGCTATGCAAAGACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1990.15902443702152821No Hit
TGCTATGCAAATACAATAAACTAGAAAAAACTGTTTGGGACCTCCGGTCA1940.15502884815164059No Hit
TGCTCTGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1900.1518323770557305No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGACA1780.14224296376800014No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGGCA1780.14224296376800014No Hit
CGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1660.13265355048026978No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCACCGGTCA1600.1278588438364046No Hit
TGCGATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1600.1278588438364046No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTATGGGACCTCCGGTCA1590.1270597260624271No Hit
TGTTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1570.12546149051447203No Hit
CTCCGATCTTGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGAC1500.11986766609662933No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTGTGGGACCTCCGGTCA1450.11587207722674167No Hit
TGCTATGCAAATACAATAAATTGGAAAAAACTGTTTGGGACCTCCGGTCA1430.11427384167878663No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGAGCTCCGGTCA1410.11267560613083157No Hit
GGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1340.10708178171298886No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACGGTTTGGGACCTCCGGTCA1340.10708178171298886No Hit
TGCTATGCAAATACAATAAACTGGAGAAAACTGTTTGGGACCTCCGGTCA1320.1054835461650338No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGATTGGGACCTCCGGTCA1320.1054835461650338No Hit
TGCTATGCAAATACAATATACTGGAAAAAACTGTTTGGGACCTCCGGTCA1280.1022870750691237No Hit
TGCTATGCAAATACACTAAACTGGAAAAAACTGTTTGGGACCTCCGGTCA1270.10148795729514616No Hit
TGCTATGCAAATACAATAAACTGGAAAAAACTGTTTGAGACCTCCGGTCA1270.10148795729514616No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)