Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000286244 |
File type | Conventional base calls |
Encoding | Illumina 1.5 |
Total Sequences | 74114716 |
Total Bases | 5.5 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 27 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCG | 378283 | 0.5104020097709071 | Illumina Paired End PCR Primer 2 (100% over 31bp) |
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAG | 267485 | 0.36090673274657087 | Illumina Paired End PCR Primer 2 (97% over 36bp) |
GTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG | 111323 | 0.15020363837054979 | Illumina Paired End PCR Primer 2 (100% over 33bp) |
GCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCC | 91523 | 0.12348829617049333 | Illumina Paired End PCR Primer 2 (100% over 30bp) |
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGT | 79510 | 0.10727963930941865 | Illumina Paired End PCR Primer 2 (100% over 50bp) |