FastQCFastQC Report
Tue 14 Feb 2023
EGAF00000362658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000362658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91378514
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG1240010.1357003901376641No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1012120.11076126713988806No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT969850.10613545324232347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)