FastQCFastQC Report
Thu 23 Feb 2023
EGAF00000362662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000362662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89511554
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4686530.523567046998201No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA1029580.11502202274356671No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1018780.11381547459225208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)