FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1986
Sequences flagged as poor quality0
Sequence length59-366
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG77338.922457200402825No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA71035.750251762336354No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTCAATGATGAAGAACTTCT1477.401812688821751No Hit
AGAAGTTCTTCATCATTGACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA1356.797583081570997No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTCAATGATGAAGAACTTC653.272910372608258No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT100.5035246727089627No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTCCTTTTGCAAGTAAACTG100.5035246727089627No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTCAATGATGAAGAACTT90.4531722054380665No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT70.35246727089627394No Hit
AGAAGTTCTTCATCATTGACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATG70.35246727089627394No Hit
AGAAGTTCTTCATCATTGACTTGCAAAGAACCATAAACACCATCATTCATATAATACATGA60.3021148036253776No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT40.2014098690835851No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT40.2014098690835851No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG30.1510574018126888No Hit
AGAAGTTCTTCATCATTGACTTGCAAAAAGAACCATAAACACCATCATTCATATAATACATGA30.1510574018126888No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.1510574018126888No Hit
AGAAGTTCCTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.1510574018126888No Hit
AGAAGTTCTTCATCATTGACTTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA20.10070493454179255No Hit
TCATGTATTATACAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGAT20.10070493454179255No Hit
AGAAGTTCTTCATCATTGAGTCTGAGGTAATTCCAGCATCTTGCATCTCA20.10070493454179255No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATTTCA20.10070493454179255No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTCAATGATGAAGAAACTTCT20.10070493454179255No Hit
AGAAGTTCTTCATCATTGACTTGCAAAAGAACCATAAACACCATCATTCATATAATACA20.10070493454179255No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAGCTG20.10070493454179255No Hit
TCATGTATTATATGGATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.10070493454179255No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTCAATGATGAAGAACT20.10070493454179255No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.10070493454179255No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTCAATGATGAAGAACTTCT20.10070493454179255No Hit
ATAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAGCCTTCCACAAT20.10070493454179255No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAAGCCAATCTCCCACATTCAGC20.10070493454179255No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)