FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1671
Sequences flagged as poor quality0
Sequence length19-359
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA41524.83542788749252No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG31518.850987432675044No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATACATGA26916.098144823459005No Hit
TCATGTATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTCT18411.011370436864153No Hit
AGAAGTTCTTCATCATTACATGA814.847396768402154No Hit
TCATGTAATGATGAAGAACTTCT784.66786355475763No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATACATG472.8126870137642133No Hit
TCATGTATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTC382.2740873728306403No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTAATGATTTTCA281.6756433273488927No Hit
TCATGTAATGATGAAGAACTTC191.1370436864153202No Hit
AGAAGTTCTTCATCATTACATG160.9575104727707959No Hit
AGAAGTTCTTCACAGGATGGACCCCAAAGGCTGCTTGTAAACAGAGGCTC130.7779772591262717No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATACATGAA110.6582884500299222No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTATCCAT100.5984440454817475No Hit
TCATGTAATGATGAAGAACTT70.41891083183722316No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATACAT60.3590664272890485No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.23937761819269898No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTAATGATTTTCAG40.23937761819269898No Hit
TCATGTATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTT40.23937761819269898No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA30.17953321364452424No Hit
TCATGTATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGAATGAAGAACTTCT30.17953321364452424No Hit
TCATGTATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACT30.17953321364452424No Hit
AGAAGTTCTTCATCATTACACGA30.17953321364452424No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.17953321364452424No Hit
AGAAGCTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.17953321364452424No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGAAGATAAGCCAATCTCCCACATT20.11968880909634949No Hit
TCATGTAATGATGAAGAACTTCTT20.11968880909634949No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTCATACCAATACATGA20.11968880909634949No Hit
AGAAGTTCTTCATTAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACA20.11968880909634949No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT20.11968880909634949No Hit
AGAAGTTCTTCATCATTGAGTCTGAGTAATTCCAGCATCTTGCATCTCATACCAATACATGA20.11968880909634949No Hit
TCATGGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTGGGAGATTGGCTT20.11968880909634949No Hit
TCATGTATTGGTATGAGATGCAAGATGCTTGGAATTACTTCAGACTCAATGAATGAAGAACTTCT20.11968880909634949No Hit
TAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAGCCTTCCACAATT20.11968880909634949No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATGCCAATACATGA20.11968880909634949No Hit
TCATGTATTGTGGAAGGCTGTCTTCTTCCTGAGCTGAATGTGGGAGATTG20.11968880909634949No Hit
AGAAGTTCTTCATCATTACATGAA20.11968880909634949No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCATACCAATACATGA20.11968880909634949No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT20.11968880909634949No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCGTGCATCTCATACCAATACATGA20.11968880909634949No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATACATGAAG20.11968880909634949No Hit
TCATGTATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTCC20.11968880909634949No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)