FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1042
Sequences flagged as poor quality0
Sequence length8-365
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG38136.56429942418426No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA25424.37619961612284No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTATAATACATGA575.47024952015355No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTAATACATGA545.182341650671785No Hit
TCATGTATTAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTCT524.990403071017274No Hit
TAATACATGA454.318618042226487No Hit
TCATGTATTA353.358925143953935No Hit
TCATGTATTATACTTCAGACTCAATGATGAAGAACTTCT343.262955854126679No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT161.5355086372360844No Hit
TCATGTATTAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTC121.1516314779270633No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTAATACATG100.9596928982725527No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTATAATACATG100.9596928982725527No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT40.3838771593090211No Hit
TCATGTATTATACTTCAGACTCAATGATGAAGAACTTC40.3838771593090211No Hit
TAATACATG30.28790786948176583No Hit
TAATACATGAA30.28790786948176583No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTAATACAT30.28790786948176583No Hit
TCATGTATTAT30.28790786948176583No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTATGAAC20.19193857965451055No Hit
TCATGTAT20.19193857965451055No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC20.19193857965451055No Hit
TCATGTATTACAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCA20.19193857965451055No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTATAATACATGAA20.19193857965451055No Hit
TCATGTATTATATGAATGATGGTGTTTATGGCTCTTTTGCAAGTAAACTG20.19193857965451055No Hit
TTCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAAC20.19193857965451055No Hit
TCATGTATTATACTTCAGACTCAATGATGAAGAACTTCTT20.19193857965451055No Hit
TCATGTATTATACTTCAGACTCAATGATGAGAAC20.19193857965451055No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC20.19193857965451055No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.19193857965451055No Hit
TCATGTATTATACTTCAGACTCAATGATGAAGAACTT20.19193857965451055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)