FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences791
Sequences flagged as poor quality0
Sequence length7-360
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA16721.11251580278129No Hit
AGAATACATGA10012.64222503160556No Hit
AGAAGTTCTTCATCATTACATGA9011.378002528445007No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG8811.125158027812896No Hit
TCATGTATTCT759.481668773704172No Hit
TCATGTAATGATGAAGAACTTCT739.22882427307206No Hit
TCATGTATTACATGATGTCATTCAGTGATTGGTATGAGATGCAAGATGCT556.95322376738306No Hit
TCATGTATTC222.781289506953224No Hit
AGAATACATGAA131.643489254108723No Hit
AGAAGTTCTTCATCATTACATG121.5170670037926675No Hit
TCATGTAATGATGAAGAACTTC91.1378002528445006No Hit
AGAATACATG60.7585335018963337No Hit
AGACAGCTTTCCACAATTTGATCAAGCTCATCACAGGATGGACCCCAAAG50.6321112515802781No Hit
TCATGTATT50.6321112515802781No Hit
AGAATACATGAAGG40.5056890012642226No Hit
AGAAGTTCTTCATCATTACATGAA40.5056890012642226No Hit
AGAATACATGAAG40.5056890012642226No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC30.37926675094816686No Hit
TCATGTATTCTT30.37926675094816686No Hit
AGAATACAT30.37926675094816686No Hit
AGAAGTTCTTCATCATTGAATTTGATCAAGCTCATCACAGGATGGACCCC30.37926675094816686No Hit
GAATACATGA20.2528445006321113No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG20.2528445006321113No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTATGAAC20.2528445006321113No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT20.2528445006321113No Hit
TCATGTATTATATGAATGATGGTTGTTTATGGTTCTTTTGCAAGTAAACT20.2528445006321113No Hit
TCAAAGATAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAGCTTTC20.2528445006321113No Hit
TCATGTAATGATGAAGAACTT20.2528445006321113No Hit
AGTAATACATGA10.12642225031605564No Hit
TCATGTATTACATGATGTCATTTCAGTGATTGGTATGAGATGCAAGATGC10.12642225031605564No Hit
AGAAGTTCTTCATCATTACAT10.12642225031605564No Hit
TCATGTAATGATGAAGAACTTCTT10.12642225031605564No Hit
TCACGTATTCT10.12642225031605564No Hit
TAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAGCTTTCCACAATT10.12642225031605564No Hit
AGAAGTTCTTCATCATTGAGTCTGAGTAATTCCAGCATCTTGCATCTCAT10.12642225031605564No Hit
TCATGTAT10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCCTTTGCAAGTAAACTG10.12642225031605564No Hit
AGGATACATGA10.12642225031605564No Hit
AGAAGTTCTTCATCATTGAGTCTGAAATAATTCCAGCATCTTGCATCTCA10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT10.12642225031605564No Hit
TCGATGTATTC10.12642225031605564No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATCCCAGCATCTTGCATCTCA10.12642225031605564No Hit
TCATGATCAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTGGGAG10.12642225031605564No Hit
TCATGTATTACATGATGTCATTCAGCGATTGGTATGAGATGCAAGATGCT10.12642225031605564No Hit
TCATGTA10.12642225031605564No Hit
TCATGTAATGATGAAGAAC10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACTGT10.12642225031605564No Hit
TTCGATGTATTATATGAATGATTGGTGTTTATGGTTCTTTTGCAAGTAAA10.12642225031605564No Hit
TCATGTATTATATCAAATTGTGGAAGGCTGTCTTCTTCCTGAGCTGAATGTGGGAGATTGGCTTATCTTTG10.12642225031605564No Hit
GAAGTTCTTCATCATTACATGA10.12642225031605564No Hit
TCATGTATTATATGGATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG10.12642225031605564No Hit
AGAATCTCCCACATTCAGCTCAGGAAGAAGACAGCTTTCCACAATTTGAT10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGATGAACC10.12642225031605564No Hit
TCATGTAATGATGAAGGACTTCT10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG10.12642225031605564No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAAGTAAAC10.12642225031605564No Hit
TCATGTAATGATGGAGAACTTCT10.12642225031605564No Hit
AGAAGTTCTTCATCATTATATGA10.12642225031605564No Hit
AGAATACATGAAGGC10.12642225031605564No Hit
TCATGTATTCTTC10.12642225031605564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)