FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1484
Sequences flagged as poor quality0
Sequence length77-373
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA79353.4366576819407No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG51134.43396226415094No Hit
TCATGTATTATGTCATTCAGTGATTGGTATGAGATGCAAGATGCTGGAAT956.401617250673855No Hit
TCATGTTTTCCATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGCCA80.5390835579514826No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT50.3369272237196766No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT40.2695417789757413No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT30.20215633423180593No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC30.20215633423180593No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG20.13477088948787064No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.13477088948787064No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC20.13477088948787064No Hit
TCATGTATTATATGAATGATGGTGCTTATGGTTCTTTTGCAAGTAAACTG20.13477088948787064No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.13477088948787064No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGTATCTTGCATCTCA20.13477088948787064No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAACATCTTGCATCTCA20.13477088948787064No Hit
TCATGTTTCCATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGCCAT20.13477088948787064No Hit
TCATGTATTACATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.13477088948787064No Hit
AGAAGCTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13477088948787064No Hit
TCATGTATTATATGGATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.13477088948787064No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.13477088948787064No Hit
TCATGTATTATGTCATTCAGTGATTGGTATGAGACGCAAGATGCTGGAAT20.13477088948787064No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)