FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1486
Sequences flagged as poor quality0
Sequence length87-367
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA77452.086137281292054No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG58939.636608344549124No Hit
TCATGTATTATATTACATGATGTCATTCAGTGATTGGTATGAGATGCAAG342.2880215343203227No Hit
TCATGTATTAGAGGCCAGCCATTTATTACATGATGTCATTCAGTGATTGG90.6056527590847914No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT50.3364737550471063No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT40.2691790040376851No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC30.2018842530282638No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT20.13458950201884254No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC20.13458950201884254No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT20.13458950201884254No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGTATCTTGCATCTCA20.13458950201884254No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA20.13458950201884254No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT20.13458950201884254No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13458950201884254No Hit
TCATGTTAGTTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAA20.13458950201884254No Hit
AGAAGTTCCTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13458950201884254No Hit
TCATGTATTTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAAC20.13458950201884254No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.13458950201884254No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)