FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1511
Sequences flagged as poor quality0
Sequence length138-363
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG74149.04037061548643No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA67444.60622104566512No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT140.9265387160820648No Hit
AGAAGACAGCTTTCCACAATTTGATCAAGCTCATCACAGGATGGACCCCA50.3309066843150232No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC50.3309066843150232No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG40.26472534745201853No Hit
AGAAGTTCTTCATAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAG40.26472534745201853No Hit
TCATGTATTATATGAATGATGGTTGTTTATGGTTCTTTTGCAAGTAAACT30.1985440105890139No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT20.13236267372600927No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTCAAGTAAACTG20.13236267372600927No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAGACTG20.13236267372600927No Hit
TCATGTATTATATGAATGATGGTGTTTATGGCTCTTTTGCAAGTAAACTG20.13236267372600927No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTC20.13236267372600927No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT20.13236267372600927No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13236267372600927No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC20.13236267372600927No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.13236267372600927No Hit
TCATGTATTAGGACTTAAATACCATTCCAGAGGTTCACAAGAAATACAAG20.13236267372600927No Hit
AGAAGTTCTTCGTCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.13236267372600927No Hit
AAGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTC20.13236267372600927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)