FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1937
Sequences flagged as poor quality0
Sequence length28-368
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG76039.235931853381516No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA69836.03510583376355No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACATGA613.1491997934950957No Hit
TCATGTACTTCAGACTCAATGATGAAGAACTTCT472.4264326277749095No Hit
TCATGTATTATATTACATGATGTCATTCAGTGATTGGTATGAGATGCAAG341.7552916881775942No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATCACTGAATAATACATGA231.1874032008260196No Hit
TCATGTATTATATGAATGATGGTGTTACATGATGTCATTCAGTGATTGGT190.980898296334538No Hit
TCATGTATTATTCAGTGATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTCT180.9292720702116675No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTACTTCAGACTCAATGATGAAGAACTTCT170.8776458440887971No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT170.8776458440887971No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACATG160.8260196179659267No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA160.8260196179659267No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT140.7227671657201858No Hit
TCATGTACTTCAGACTCAATGATGAAGAACTTC140.7227671657201858No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC130.6711409395973155No Hit
TCATGTATTATTCAGTGATTGGTATGAGATGCAAGATGCTGGAATTACTTCAGACTCAATGATGAAGAACTTC60.3097573567372225No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATCACTGAATAATACATG50.2581311306143521No Hit
AGAACAGGATGGACCCCAAAGGCTGCTTGTAAACAGAGGCTCATCTTCCT50.2581311306143521No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTTTTATT40.20650490449148168No Hit
TCATGTACTTCAGACTCAATGATGAAGAACTT40.20650490449148168No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACATGAA40.20650490449148168No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA40.20650490449148168No Hit
TCACGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTACTTCAGACTCAATGATGAAGAACTTC30.15487867836861124No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTACTTCAGACTCAATGATGAAGAACTTCT30.15487867836861124No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC30.15487867836861124No Hit
TCATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGCCATTTATTACA30.15487867836861124No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.15487867836861124No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACAT30.15487867836861124No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTACTTCAGACTCAATGATGAAGAACTTC30.15487867836861124No Hit
TCATGTATTATAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTGG30.15487867836861124No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTACTTCAGACTCAATGATGAAGAACTT20.10325245224574084No Hit
TCATGTACTTCAGACTCAATGATGAAGAACTTCTT20.10325245224574084No Hit
TCATGTATTATATTACATGATGTCATTCAGTTGATTGGTATGAGATGCAA20.10325245224574084No Hit
TCATGTACTTCAGACTCAATGATGAGAAC20.10325245224574084No Hit
TCATGTATTATATGAATGATGGTGTTTATAGTTCTTTTGCAAGTAAACTG20.10325245224574084No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.10325245224574084No Hit
AGAAGTTCTTCATCATTGAGGAAAGAATCTGCTCCCATGTTATCAAAGAT20.10325245224574084No Hit
TCATGTACTTCAGACTCAATGATGAAGAA20.10325245224574084No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACTTGCAAAGAACCATAAACACCATCATTCATATAATACATGA20.10325245224574084No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTTGCAAGTAAAC20.10325245224574084No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.10325245224574084No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCATACCAATCACTGAATAATACAT20.10325245224574084No Hit
TCATGTTAGTTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAA20.10325245224574084No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC20.10325245224574084No Hit
CCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.10325245224574084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)