FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1002
Sequences flagged as poor quality0
Sequence length16-357
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTAATGATGAAGAACTTCT35635.528942115768466No Hit
AGAAGTTCTTCATCATTACATGA34934.830339321357286No Hit
TCATGTAATGATGAAGAACTTC807.984031936127744No Hit
AGAAGTTCTTCATCATTACATG454.491017964071856No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA333.293413173652695No Hit
TCATGTAATGATGAAGAACTT292.8942115768463075No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG272.694610778443114No Hit
AGAAGTTCTTCATCATTACATGAA131.2974051896207583No Hit
TCATGTAATGATGAGAACT80.7984031936127743No Hit
TCATGTAATGATGAAGAACTTCTT80.7984031936127743No Hit
TCATGTAATGATGAGAAC80.7984031936127743No Hit
AGAAGTTCTTCATCATTACAT30.29940119760479045No Hit
TCATGTAATGATGAGAA30.29940119760479045No Hit
AGAAGTTCTTCATCATTACA30.29940119760479045No Hit
TCATGTAATGATGAGGAACTTC20.19960079840319359No Hit
AGAAGTTCCTCATCATTACATGA20.19960079840319359No Hit
TCATGTAATGATGAAGAA20.19960079840319359No Hit
AGAAGTTCTTCATCATTACATGAAG20.19960079840319359No Hit
GGAAGTTCTTCATCATTACATGA20.19960079840319359No Hit
AGAAGTTCTTCACCATTACATGA20.19960079840319359No Hit
TCATGTAATGATGAAGAACTTCC20.19960079840319359No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)