FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1533
Sequences flagged as poor quality0
Sequence length137-370
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA76750.032615786040445No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG65542.72667971298108No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT171.1089367253750815No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT90.5870841487279843No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT80.5218525766470972No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.2609262883235486No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA40.2609262883235486No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCG40.2609262883235486No Hit
TCATGTATTATATGAATGATGGTATTTATGGTTCTTTTGCAAGTAAACTG20.1304631441617743No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCACCTTGCATCTCA20.1304631441617743No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG20.1304631441617743No Hit
TCATGTATTATATGAATGATGGTTGTTTATGGTTCTTTTGCAAGTAAACT20.1304631441617743No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.1304631441617743No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC20.1304631441617743No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.1304631441617743No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT20.1304631441617743No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATCTC20.1304631441617743No Hit
AGAGGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.1304631441617743No Hit
TCATGTATTATATGAATGATGGCGTTTATGGTTCTTTTGCAAGTAAACTG20.1304631441617743No Hit
AGAAGTTCTTCATCATTGAAGTCTGAAGTAATTCCAGTCATCTTGCAATC20.1304631441617743No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAATAAACTG20.1304631441617743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)