FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2224
Sequences flagged as poor quality0
Sequence length135-363
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA113951.21402877697842No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG95142.760791366906474No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT130.5845323741007195No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTTCCACAAT80.3597122302158274No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT70.3147482014388489No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC50.22482014388489208No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAACATCTTGCATCTCA50.22482014388489208No Hit
TCATGTATTATATGAATGGTGGTGTTTATGGTTCTTTTGCAAGTAAACTG40.1798561151079137No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT40.1798561151079137No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCGGCATCTTGCATCTCA40.1798561151079137No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT30.13489208633093525No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC30.13489208633093525No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTA30.13489208633093525No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC30.13489208633093525No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30.13489208633093525No Hit
TCATTGGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAA30.13489208633093525No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTACATCTCA30.13489208633093525No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG30.13489208633093525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)