FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2698
Sequences flagged as poor quality0
Sequence length56-364
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA67224.90733876945886No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAACTTCT64023.721275018532246No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA51218.977020014825797No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG36813.63973313565604No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAACTTC1084.002965159377316No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATG732.705707931801334No Hit
AGAAGTTCTTCATCATTACTTGCAAAGAACCATAAACACCATCATTCATATAATACATGA411.519644180874722No Hit
TCATGTATTATATATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGC391.445515196441809No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGAA110.407709414381023No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAACTT100.37064492216456635No Hit
AGAAGTTCTTCATCATTACTTGCAAAGAACCATAAACACCATCATTCATATAATACATG90.3335804299481097No Hit
AGAAGTTCTTCATCATTACTTGCAAAGAACCATAACACCATCATTCATATAATACATGA90.3335804299481097No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTGCAAGTAATGATGAAGAACTTCT70.25945144551519644No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTGCAAGTAATGATGAAGAACTTC60.2223869532987398No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACAT50.18532246108228317No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.14825796886582654No Hit
AGAAGTTCTTCATCATTACTTGCAAAAAGAACCATAAACACCATCATTCATATAATACATGA40.14825796886582654No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAAACACCATCATTCATATAAATACATGA40.14825796886582654No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAATGATGAAGAACTTCT40.14825796886582654No Hit
TCATGTATTATATGAATGATGGTGTTATGGTTCTTTTGCAAGTAATGATGAAGAACTTCT30.1111934766493699No Hit
TCATGTATTATATGAATGATGGTGTTATGGTTCTTTGCAAGTAATGATGAAGAACTTC30.1111934766493699No Hit
AGAAGTTCTTCATCACTACTTGCAAAAGAACCATAAACACCATCATTCATATAATACATGA30.1111934766493699No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAAACTTCT30.1111934766493699No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAACGATGAAGAACTTCT30.1111934766493699No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAACCATAACACCATCATTCATATAATACATGA30.1111934766493699No Hit
AGATAAGCCAATCTCCCACATTCAGCTCAGGAAGAAGACAGCTTTCCACA30.1111934766493699No Hit
AGAAGTTCTTCATCATTACTTGCAAAAGAATCATAAACACCATCATTCATATAATACATGA30.1111934766493699No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAAGAACTTCTT30.1111934766493699No Hit
AGAAGTTCTTCATCATTACTTGCAAAGAACCATAACACCATCATTCATATAATACATG30.1111934766493699No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAATGATGAGAACTTCT30.1111934766493699No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)