FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1698
Sequences flagged as poor quality0
Sequence length79-365
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA87051.23674911660777No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG63937.63250883392226No Hit
TCATGTACATGATGTCATTCAGTGATTGGTATGAGATGCAAGATGCTGGA724.240282685512367No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG201.1778563015312131No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT150.88339222614841No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT60.35335689045936397No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC40.23557126030624262No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAGACTG40.23557126030624262No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC40.23557126030624262No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC30.17667844522968199No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG30.17667844522968199No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.11778563015312131No Hit
TCATGTACATGACGTCATTCAGTGATTGGTATGAGATGCAAGATGCTGGA20.11778563015312131No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA20.11778563015312131No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.11778563015312131No Hit
TCATGTACATGATGTCATTCAGTGATTGGTATGAGACGCAAGATGCTGGA20.11778563015312131No Hit
AGAAGTTCTTCATAATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.11778563015312131No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT20.11778563015312131No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)