FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1227
Sequences flagged as poor quality0
Sequence length22-366
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG34928.44335778321108No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA30725.020374898125507No Hit
AGAAGTTCTTCATCATTAATACATGA19415.810920945395274No Hit
TCATGTATTAATGATGAAGAACTTCT18615.158924205378973No Hit
TCATGTATTAATGATGAAGAACTTC393.1784841075794623No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTGTGAACCTCTGGAATGGTATTT352.852485737571312No Hit
AGAAGTTCTTCATCATTAATACATG171.3854930725346373No Hit
AGAAGTTCTTCATCATTAATACATGAA131.0594947025264874No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT110.8964955175224123No Hit
TCATGTATTAATGATGAAGAACTTCTT70.5704971475142625No Hit
TCTTCCTGAGCTGAATGTGGGAGATTGGCTTATCTTTGATAACATGGGAG50.40749796251018744No Hit
TCATGTATTAATGATGAAGAACTT40.32599837000814996No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT30.24449877750611246No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC30.24449877750611246No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATACT30.24449877750611246No Hit
TCATGTATTAATGATGAAGAACT30.24449877750611246No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA20.16299918500407498No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC20.16299918500407498No Hit
AGAAGTTCTTCATCATTAATACAT20.16299918500407498No Hit
TCATGTATTATATGAATGATGGTGTTTATAGTTCTTTTGCAAGTAAACTG20.16299918500407498No Hit
AGAAGTTCTTCATCATTGGGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.16299918500407498No Hit
TTCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAAC20.16299918500407498No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTCTGCAAGTAAACTG20.16299918500407498No Hit
TCATGTATTATATGAATGATGGTGTTCATGGTTCTTTTGCAAGTAAACTG20.16299918500407498No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)