FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1679
Sequences flagged as poor quality0
Sequence length138-364
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA88752.82906491959499No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG67740.321620011911854No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT130.7742703990470519No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC70.4169148302561048No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.4169148302561048No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA50.29779630732578916No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCCTGCATCTCA40.23823704586063135No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC40.23823704586063135No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG30.1786777843954735No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC30.1786777843954735No Hit
AGAAGTTCTTCATCATTGAGTATGAAGTAATTCCAGCATCTTGCATCTCA30.1786777843954735No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATCTC30.1786777843954735No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCCCA30.1786777843954735No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT30.1786777843954735No Hit
TCATGTATTATATGAATGATGGCGTTTATGGTTCTTTTGCAAGTAAACTG30.1786777843954735No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA20.11911852293031568No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.11911852293031568No Hit
TCATGTATTATATGAATGATGGTGTTTATAGTTCTTTTGCAAGTAAACTG20.11911852293031568No Hit
GGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.11911852293031568No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.11911852293031568No Hit
TCATGTATTATATGAATAATGGTGTTTTATGGTTCTTTTTGCAAGTAAAC20.11911852293031568No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)