FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1644
Sequences flagged as poor quality0
Sequence length31-364
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA73744.82968369829683No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG70242.700729927007295No Hit
TCATGTACTTCAGACTCAATGATGAAGAACTTCT382.3114355231143553No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACATGA352.1289537712895377No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT110.6690997566909975No Hit
TCATGTACTTCAGACTCAATGATGAAGAACTTC90.5474452554744526No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT80.48661800486618007No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG70.4257907542579075No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC60.36496350364963503No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCACCTCA30.18248175182481752No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCAATCTC30.18248175182481752No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACATG30.18248175182481752No Hit
TCATGTATTATATGAATGATGGTGTTTATGATTCTTTTGCAAGTAAACTG30.18248175182481752No Hit
TCATGTATTATATGAATGATGGTGTTTATTGGTTCTTTTGCAAGTAAACT30.18248175182481752No Hit
AGAAGTTCTTCACCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12165450121654502No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG20.12165450121654502No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT20.12165450121654502No Hit
TCATGTATTATATGAATGATGGTGTTATGGTTCTTTTGCAAGTAAACTGT20.12165450121654502No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATTTCA20.12165450121654502No Hit
TCATGCATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.12165450121654502No Hit
AGAAGTTCTTCATCATTGAGTACTGAAGTAATTCCAGCATCTTGCATCTC20.12165450121654502No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGTAAACTGT20.12165450121654502No Hit
AGAGGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA20.12165450121654502No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT20.12165450121654502No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTACATGAA20.12165450121654502No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC20.12165450121654502No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)