FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1377
Sequences flagged as poor quality0
Sequence length137-369
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG74253.88525780682644No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA52137.83587509077705No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT271.9607843137254901No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT100.7262164124909223No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATACTC50.36310820624546114No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT50.36310820624546114No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT40.29048656499636893No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.2178649237472767No Hit
CCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG30.2178649237472767No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCACCTTGCATCTCA20.14524328249818447No Hit
TCATGTATTATATGAATGATGGTGTTTGTGGTTCTTTTGCAAGTAAACTG20.14524328249818447No Hit
AGAAGTTCTTCATCATTGAGCCTGAAGTAATTCCAGCATCTTGCATCTCA20.14524328249818447No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCCTTTGCAAGTAAACTG20.14524328249818447No Hit
TTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTC20.14524328249818447No Hit
TCATGCATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.14524328249818447No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)