FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000364712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1038
Sequences flagged as poor quality0
Sequence length169-373
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG47345.568400770712906No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA38336.897880539499035No Hit
AGACAGCTTTCCACAATTTGATCAAGCTCATCACAGGATGGACCCCAAAG837.996146435452794No Hit
AGAAGTTCTTCATCATTATCTCCCACATTCAGCTCAGGAAGAAGACAGCT161.5414258188824663No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTGCAAGTAAACTGT121.1560693641618496No Hit
AGACAGCTTTCCACAATTTGATCAAGCTCATCACAGGATGGACCCCAAGG60.5780346820809248No Hit
AGACAGCTTTCCACAATTTGATCAAGCTCATCACAGGATGGACCCCAAAA50.48169556840077066No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGTCAAGTAAACT40.3853564547206166No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC40.3853564547206166No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT30.2890173410404624No Hit
AGACAGCTTTCTACAATTTGATCAAGCTCATCACAGGATGGACCCCAAAG30.2890173410404624No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTTCTTTTGCAAGTAAACT20.1926782273603083No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT20.1926782273603083No Hit
TCATGTATTACAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCA20.1926782273603083No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTGCAAGTAACTGTC20.1926782273603083No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGTCAAGTAAAC20.1926782273603083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)