FastQCFastQC Report
Tue 7 May 2024
EGAF00000364713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000364713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1407
Total Bases488.7 kbp
Sequences flagged as poor quality0
Sequence length127-368
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG67147.69012082444918No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTCA60342.857142857142854No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAGTAAACT211.4925373134328357No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCATCTTGCATCTAC90.6396588486140725No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTTGCAAGTAAACT70.4975124378109453No Hit
AGAAGTTCTTCATCATTGAGTCTGAATTCCAGCATCTTGCATCTCATACC60.42643923240938164No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTGCAAGTAAACT50.35536602700781805No Hit
TCATGTATTATCCATGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGC50.35536602700781805No Hit
AGAAGTTCTTCATCATTGAGTCTGAAGTAATTCCAGCACCTTGCATCTCA30.21321961620469082No Hit
TCATGTATTATATGAATGATGGTGTTTAATGGTTCTTTTTGCAAGTAAAC30.21321961620469082No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAAGTAAACT30.21321961620469082No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAAAACT30.21321961620469082No Hit
TCATGTATTATATGAATGATGGTGTTTTATGGTTCTTTTGCAAAGTAAAC30.21321961620469082No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATTCTTGCATCT20.14214641080312723No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAAGTAGACTG20.14214641080312723No Hit
AGAAGTTCTTCATCATTGAGTCTAGAAGTAATTCCAGCATCTTGCATCTC20.14214641080312723No Hit
TCATGTATTATATGGATGATGGTGTTTATGGTTCTTTTGCAAGTAAACTG20.14214641080312723No Hit
TCATGTATTATATGAATGATGGTGTTTATGGTTCTTTTGCAGGTAAACTG20.14214641080312723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)